TreeDT: Tree Pattern Mining for Gene Mapping
نویسندگان
چکیده
منابع مشابه
Gene Mapping by Haplotype Pattern Mining
We describe a new method for linkage disequilibrium mapping, Haplotype Pattern Mining (HPM). The method is based on discovering recurrent patterns, inspired by data mining methods. We define a class of useful haplotype patterns in genetic case-control data, and give an algorithm for finding disease-associated haplotypes. The haplotypes are ordered by their strength of association to the phenoty...
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Localization of disease susceptibility genes to certain areas in the human genome, or gene mapping, requires careful analysis of genetic marker data. Gene mapping is often carried out using a sample of individuals affected by the disease of interest and a sample of healthy controls. From a data mining perspective, gene mapping can then be cast as a pattern discovery and analysis task: which gen...
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ژورنال
عنوان ژورنال: IEEE/ACM Transactions on Computational Biology and Bioinformatics
سال: 2006
ISSN: 1545-5963
DOI: 10.1109/tcbb.2006.28